This tutorial is an animated, step-by-step guide on how to run your first pipeline on the Deploit platform. With Deploit, running an analysis is easy as 1-2-3.
How to run your first pipeline on the Deploit platform: A step-by-step animated guide
Bringing together high-quality open-source community resources with Deploit
Over the last few years open-source has been increasingly becoming the norm, even in Bioinformatics. The number of high-quality applications which are freely available on GitHub and other Git providers is increasing, such as the pipelines that the Broad institute uses for production.
DeepVariant as a Nextflow Pipeline on Deploit
In December 2017, the team at Google Brain joined the effort by releasing an open source, deep learning based variant caller: DeepVariant. DeepVariant outperforms its competitors by accuracy - it even won the accuracy award at the precision FDA Truth Challenge.